Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
ALDH1A1P00352 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.39■□□□□ 0.85
ALDH1A1P00352 AC067863.1-201ENST00000494933 530 ntBASIC20.39■□□□□ 0.85
ALDH1A1P00352 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.39■□□□□ 0.85
ALDH1A1P00352 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.39■□□□□ 0.85
ALDH1A1P00352 AL353135.1-201ENST00000606729 504 ntBASIC20.39■□□□□ 0.85
ALDH1A1P00352 REXO1L3P-201ENST00000622202 1288 ntBASIC20.39■□□□□ 0.85
ALDH1A1P00352 AC092902.6-201ENST00000641783 218 ntBASIC20.39■□□□□ 0.85
ALDH1A1P00352 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ALDH1A1P00352 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 AL121761.2-201ENST00000598007 1648 ntBASIC20.38■□□□□ 0.85
ALDH1A1P00352 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 AC109322.1-201ENST00000524499 1264 ntBASIC20.38■□□□□ 0.85
ALDH1A1P00352 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
ALDH1A1P00352 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALDH1A1P00352 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 AC015922.1-201ENST00000421102 1152 ntBASIC20.37■□□□□ 0.85
ALDH1A1P00352 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 HLA-J-202ENST00000469281 1241 ntBASIC20.37■□□□□ 0.85
ALDH1A1P00352 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALDH1A1P00352 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.37■□□□□ 0.85
ALDH1A1P00352 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALDH1A1P00352 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 AP002414.1-201ENST00000391405 1147 ntBASIC20.36■□□□□ 0.85
ALDH1A1P00352 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALDH1A1P00352 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALDH1A1P00352 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALDH1A1P00352 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALDH1A1P00352 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALDH1A1P00352 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.36■□□□□ 0.85
ALDH1A1P00352 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 AC003669.1-201ENST00000334569 611 ntBASIC20.35■□□□□ 0.85
ALDH1A1P00352 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 AC022145.2-201ENST00000598203 171 ntBASIC20.35■□□□□ 0.85
ALDH1A1P00352 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms