Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.13■□□□□ 0.81
GGPS1O95749 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.13■□□□□ 0.81
GGPS1O95749 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 AL590627.1-203ENST00000421194 1026 ntBASIC20.13■□□□□ 0.81
GGPS1O95749 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.13■□□□□ 0.81
GGPS1O95749 BX640515.1-201ENST00000617215 977 ntBASIC20.13■□□□□ 0.81
GGPS1O95749 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.13■□□□□ 0.81
GGPS1O95749 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GGPS1O95749 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GGPS1O95749 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.13■□□□□ 0.81
GGPS1O95749 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
GGPS1O95749 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.13■□□□□ 0.81
GGPS1O95749 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GGPS1O95749 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.13■□□□□ 0.81
GGPS1O95749 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GGPS1O95749 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.12■□□□□ 0.81
GGPS1O95749 AP005117.1-201ENST00000584346 1413 ntBASIC20.12■□□□□ 0.81
GGPS1O95749 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 ABCD1P5-201ENST00000445663 754 ntBASIC20.12■□□□□ 0.81
GGPS1O95749 AC018712.1-201ENST00000455767 687 ntBASIC20.12■□□□□ 0.81
GGPS1O95749 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.12■□□□□ 0.81
GGPS1O95749 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GGPS1O95749 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
GGPS1O95749 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
GGPS1O95749 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
GGPS1O95749 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 RNPS1P1-201ENST00000507437 918 ntBASIC20.11■□□□□ 0.81
GGPS1O95749 AC073648.2-201ENST00000510116 352 ntBASIC20.11■□□□□ 0.81
GGPS1O95749 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.11■□□□□ 0.81
GGPS1O95749 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.11■□□□□ 0.81
GGPS1O95749 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.11■□□□□ 0.81
GGPS1O95749 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.11■□□□□ 0.81
GGPS1O95749 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
GGPS1O95749 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
GGPS1O95749 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.1■□□□□ 0.81
GGPS1O95749 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.1■□□□□ 0.81
GGPS1O95749 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.1■□□□□ 0.81
GGPS1O95749 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.1■□□□□ 0.81
GGPS1O95749 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.1■□□□□ 0.81
GGPS1O95749 SCARNA2-201ENST00000458748 420 ntBASIC20.1■□□□□ 0.81
GGPS1O95749 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.1■□□□□ 0.81
GGPS1O95749 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.1■□□□□ 0.81
GGPS1O95749 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.1■□□□□ 0.81
GGPS1O95749 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.1■□□□□ 0.81
GGPS1O95749 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.1■□□□□ 0.81
GGPS1O95749 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.1■□□□□ 0.81
GGPS1O95749 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
GGPS1O95749 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.1■□□□□ 0.81
GGPS1O95749 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GGPS1O95749 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
GGPS1O95749 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms