Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX4O95219 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX4O95219 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX4O95219 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNX4O95219 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX4O95219 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX4O95219 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX4O95219 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX4O95219 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNX4O95219 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SNX4O95219 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 AC073592.3-201ENST00000625118 1834 ntBASIC16.91■□□□□ 0.3
SNX4O95219 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 AL162741.1-201ENST00000565563 1558 ntBASIC16.91■□□□□ 0.3
SNX4O95219 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX4O95219 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.91■□□□□ 0.3
SNX4O95219 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX4O95219 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX4O95219 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SNX4O95219 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX4O95219 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
SNX4O95219 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 AC126763.1-201ENST00000552015 2118 ntBASIC16.9■□□□□ 0.3
SNX4O95219 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNX4O95219 AC112777.1-201ENST00000540175 1423 ntBASIC16.9■□□□□ 0.3
SNX4O95219 LINC01311-201ENST00000565162 1445 ntBASIC16.9■□□□□ 0.3
SNX4O95219 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX4O95219 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX4O95219 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SNX4O95219 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX4O95219 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX4O95219 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX4O95219 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SNX4O95219 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX4O95219 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX4O95219 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX4O95219 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX4O95219 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX4O95219 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX4O95219 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
SNX4O95219 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX4O95219 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX4O95219 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNX4O95219 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SNX4O95219 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX4O95219 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX4O95219 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX4O95219 ZNF444P1-201ENST00000559497 298 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms