Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.87■□□□□ 0.45
KLHL41O60662 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.87■□□□□ 0.45
KLHL41O60662 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.87■□□□□ 0.45
KLHL41O60662 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.87■□□□□ 0.45
KLHL41O60662 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KLHL41O60662 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL41O60662 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KLHL41O60662 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 AP000523.1-201ENST00000398242 1049 ntBASIC17.86■□□□□ 0.45
KLHL41O60662 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL41O60662 AC092647.4-201ENST00000457211 535 ntBASIC17.86■□□□□ 0.45
KLHL41O60662 AC091390.4-202ENST00000476426 537 ntBASIC17.86■□□□□ 0.45
KLHL41O60662 COX11P1-201ENST00000489116 835 ntBASIC17.86■□□□□ 0.45
KLHL41O60662 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL41O60662 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.86■□□□□ 0.45
KLHL41O60662 AC006011.2-201ENST00000621313 1158 ntBASIC17.86■□□□□ 0.45
KLHL41O60662 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.86■□□□□ 0.45
KLHL41O60662 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 PHGDH-209ENST00000641074 1780 ntBASIC17.86■□□□□ 0.45
KLHL41O60662 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
KLHL41O60662 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL41O60662 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 FAM8A6P-201ENST00000407496 1135 ntBASIC17.85■□□□□ 0.45
KLHL41O60662 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 GMCL1P1-201ENST00000463439 1581 ntBASIC17.85■□□□□ 0.45
KLHL41O60662 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.85■□□□□ 0.45
KLHL41O60662 KRT18P41-201ENST00000518924 1277 ntBASIC17.85■□□□□ 0.45
KLHL41O60662 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL41O60662 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
KLHL41O60662 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.85■□□□□ 0.45
KLHL41O60662 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL41O60662 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL41O60662 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 AC141586.5-201ENST00000624546 2050 ntBASIC17.84■□□□□ 0.45
KLHL41O60662 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL41O60662 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL41O60662 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL41O60662 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KLHL41O60662 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 AC007663.1-201ENST00000438948 1240 ntBASIC17.84■□□□□ 0.45
KLHL41O60662 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL41O60662 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 AL353719.1-201ENST00000566847 864 ntBASIC17.84■□□□□ 0.45
KLHL41O60662 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHL41O60662 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms