Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRICKLE3O43900 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 AC097374.2-201ENST00000618617 1306 ntBASIC17.24■□□□□ 0.35
PRICKLE3O43900 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.24■□□□□ 0.35
PRICKLE3O43900 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 AP000867.3-201ENST00000524675 377 ntBASIC17.24■□□□□ 0.35
PRICKLE3O43900 KRT126P-201ENST00000549467 1181 ntBASIC17.24■□□□□ 0.35
PRICKLE3O43900 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.24■□□□□ 0.35
PRICKLE3O43900 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRICKLE3O43900 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 NSUN5P1-202ENST00000421140 1535 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 NSUN5P2-203ENST00000457352 1529 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 AC096633.1-201ENST00000422446 749 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 VENTXP7-201ENST00000475503 772 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 KRT18P56-201ENST00000507275 550 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 AC074051.2-201ENST00000565115 352 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.23■□□□□ 0.35
PRICKLE3O43900 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 NOC2LP1-202ENST00000452600 2235 ntBASIC17.23■□□□□ 0.35
PRICKLE3O43900 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRICKLE3O43900 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRICKLE3O43900 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.22■□□□□ 0.35
PRICKLE3O43900 SLC25A6P5-201ENST00000435663 894 ntBASIC17.22■□□□□ 0.35
PRICKLE3O43900 NUS1P1-201ENST00000446295 882 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms