Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
CUX2O14529 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC30.51■■■□□ 2.48
CUX2O14529 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC30.51■■■□□ 2.48
CUX2O14529 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC30.51■■■□□ 2.48
CUX2O14529 AD001527.2-201ENST00000622994 785 ntBASIC30.51■■■□□ 2.48
CUX2O14529 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC30.51■■■□□ 2.48
CUX2O14529 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CUX2O14529 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC30.51■■■□□ 2.47
CUX2O14529 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CUX2O14529 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CUX2O14529 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
CUX2O14529 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC30.51■■■□□ 2.47
CUX2O14529 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC30.51■■■□□ 2.47
CUX2O14529 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CUX2O14529 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
CUX2O14529 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CUX2O14529 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC30.51■■■□□ 2.47
CUX2O14529 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CUX2O14529 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CUX2O14529 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CUX2O14529 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC30.5■■■□□ 2.47
CUX2O14529 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC30.5■■■□□ 2.47
CUX2O14529 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CUX2O14529 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC30.5■■■□□ 2.47
CUX2O14529 AC023141.13-201ENST00000604991 943 ntBASIC30.5■■■□□ 2.47
CUX2O14529 AL158211.3-201ENST00000607385 239 ntBASIC30.5■■■□□ 2.47
CUX2O14529 AC007064.4-201ENST00000637740 555 ntBASIC30.5■■■□□ 2.47
CUX2O14529 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC30.5■■■□□ 2.47
CUX2O14529 REM2-202ENST00000536884 1331 ntTSL 2 BASIC30.5■■■□□ 2.47
CUX2O14529 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC30.5■■■□□ 2.47
CUX2O14529 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CUX2O14529 HCG4-201ENST00000418983 998 ntBASIC30.5■■■□□ 2.47
CUX2O14529 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CUX2O14529 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC30.5■■■□□ 2.47
CUX2O14529 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC30.5■■■□□ 2.47
CUX2O14529 BAD-207ENST00000544785 525 ntTSL 3 BASIC30.5■■■□□ 2.47
CUX2O14529 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC30.5■■■□□ 2.47
CUX2O14529 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
CUX2O14529 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC30.49■■■□□ 2.47
CUX2O14529 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CUX2O14529 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CUX2O14529 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CUX2O14529 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC30.49■■■□□ 2.47
CUX2O14529 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC30.49■■■□□ 2.47
CUX2O14529 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC30.49■■■□□ 2.47
CUX2O14529 TREML5P-201ENST00000421694 576 ntBASIC30.49■■■□□ 2.47
CUX2O14529 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CUX2O14529 AC069335.1-201ENST00000489972 472 ntBASIC30.49■■■□□ 2.47
CUX2O14529 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CUX2O14529 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CUX2O14529 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CUX2O14529 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
CUX2O14529 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
CUX2O14529 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC30.48■■■□□ 2.47
CUX2O14529 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC30.48■■■□□ 2.47
CUX2O14529 MIR1909-201ENST00000411312 80 ntBASIC30.48■■■□□ 2.47
CUX2O14529 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC30.48■■■□□ 2.47
CUX2O14529 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC30.48■■■□□ 2.47
CUX2O14529 POLI-202ENST00000406285 2030 ntTSL 2 BASIC30.48■■■□□ 2.47
CUX2O14529 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CUX2O14529 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 NCF1C-201ENST00000438382 1427 ntBASIC30.47■■■□□ 2.47
CUX2O14529 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC30.47■■■□□ 2.47
CUX2O14529 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC30.47■■■□□ 2.47
CUX2O14529 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CUX2O14529 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC30.46■■■□□ 2.47
CUX2O14529 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC30.46■■■□□ 2.47
CUX2O14529 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 OR7E47P-204ENST00000575924 449 ntBASIC30.46■■■□□ 2.47
CUX2O14529 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC30.46■■■□□ 2.47
CUX2O14529 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CUX2O14529 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms