Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 AP003733.1-201ENST00000491725 852 ntBASIC17.61■□□□□ 0.41
TAF4O00268 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.61■□□□□ 0.41
TAF4O00268 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 AC112497.1-201ENST00000624824 639 ntBASIC17.61■□□□□ 0.41
TAF4O00268 FAM215A-202ENST00000632077 792 ntBASIC17.61■□□□□ 0.41
TAF4O00268 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.61■□□□□ 0.41
TAF4O00268 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TAF4O00268 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TAF4O00268 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.6■□□□□ 0.41
TAF4O00268 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.6■□□□□ 0.41
TAF4O00268 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.6■□□□□ 0.41
TAF4O00268 HNRNPDP1-201ENST00000439535 754 ntBASIC17.6■□□□□ 0.41
TAF4O00268 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 SCARNA2-201ENST00000458748 420 ntBASIC17.6■□□□□ 0.41
TAF4O00268 RN7SL606P-201ENST00000472779 293 ntBASIC17.6■□□□□ 0.41
TAF4O00268 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.6■□□□□ 0.41
TAF4O00268 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 AL356488.2-201ENST00000602755 427 ntBASIC17.6■□□□□ 0.41
TAF4O00268 AL592071.1-201ENST00000611956 408 ntBASIC17.6■□□□□ 0.41
TAF4O00268 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 AC124864.1-201ENST00000623408 392 ntBASIC17.6■□□□□ 0.41
TAF4O00268 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.6■□□□□ 0.41
TAF4O00268 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TAF4O00268 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TAF4O00268 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.6■□□□□ 0.41
TAF4O00268 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.59■□□□□ 0.41
TAF4O00268 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TAF4O00268 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
TAF4O00268 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TAF4O00268 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.59■□□□□ 0.41
TAF4O00268 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.59■□□□□ 0.41
TAF4O00268 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.59■□□□□ 0.41
TAF4O00268 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
TAF4O00268 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.59■□□□□ 0.41
TAF4O00268 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.59■□□□□ 0.41
TAF4O00268 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TAF4O00268 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TAF4O00268 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TAF4O00268 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TAF4O00268 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.58■□□□□ 0.41
TAF4O00268 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TAF4O00268 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TAF4O00268 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TAF4O00268 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.58■□□□□ 0.4
TAF4O00268 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.58■□□□□ 0.4
TAF4O00268 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms