Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MAX-217ENST00000557277 728 ntTSL 3 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AC068418.2-201ENST00000577309 3703 ntBASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AC138969.2-201ENST00000532739 9932 ntBASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AC027612.3-201ENST00000413684 1047 ntBASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PHGDH-209ENST00000641074 1780 ntBASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AL603756.1-201ENST00000606511 2163 ntBASIC11.4□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 AGGF1P2-201ENST00000426656 2106 ntBASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TMEM256-PLSCR3K7ERE1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms