Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CCR12P-201ENST00000446203 998 ntBASIC19.1■□□□□ 0.65
RCCD1A6NED2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RCCD1A6NED2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 TSPY7P-201ENST00000431358 1114 ntBASIC19.09■□□□□ 0.65
RCCD1A6NED2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 AL121761.2-201ENST00000598007 1648 ntBASIC19.09■□□□□ 0.65
RCCD1A6NED2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RCCD1A6NED2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RCCD1A6NED2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
RCCD1A6NED2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RCCD1A6NED2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.08■□□□□ 0.65
RCCD1A6NED2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RCCD1A6NED2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RCCD1A6NED2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RCCD1A6NED2 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.08■□□□□ 0.64
RCCD1A6NED2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RCCD1A6NED2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 AC116562.4-202ENST00000641738 218 ntBASIC19.08■□□□□ 0.64
RCCD1A6NED2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RCCD1A6NED2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RCCD1A6NED2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RCCD1A6NED2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.08■□□□□ 0.64
RCCD1A6NED2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RCCD1A6NED2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RCCD1A6NED2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms