Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 TMEM191A-211ENST00000637163 1067 ntBASIC19.5■□□□□ 0.71
CCDC66A2RUB6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 MYLKP1-201ENST00000509077 1580 ntBASIC19.49■□□□□ 0.71
CCDC66A2RUB6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 B3GAT3P1-201ENST00000471720 806 ntBASIC19.49■□□□□ 0.71
CCDC66A2RUB6 AC011506.1-201ENST00000474329 610 ntBASIC19.49■□□□□ 0.71
CCDC66A2RUB6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 MIR6786-201ENST00000616843 113 ntBASIC19.49■□□□□ 0.71
CCDC66A2RUB6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 AC008556.1-201ENST00000610908 2040 ntBASIC19.49■□□□□ 0.71
CCDC66A2RUB6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC66A2RUB6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 AC093677.2-201ENST00000600169 1863 ntBASIC19.48■□□□□ 0.71
CCDC66A2RUB6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 RPPH1-201ENST00000516869 333 ntBASIC19.48■□□□□ 0.71
CCDC66A2RUB6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC66A2RUB6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 AC022211.2-201ENST00000585075 2527 ntBASIC19.47■□□□□ 0.71
CCDC66A2RUB6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 KRT18P29-201ENST00000397031 1267 ntBASIC19.47■□□□□ 0.71
CCDC66A2RUB6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms