Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC079602.3-201ENST00000623931 403 ntBASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 AC009949.1-201ENST00000623048 1830 ntBASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TCRBV7S3A2A0A539 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 AC099398.1-201ENST00000567919 2776 ntBASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 LINC00304-203ENST00000565008 1864 ntBASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 AL023973.1-201ENST00000624619 620 ntBASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 AC133963.1-201ENST00000504166 1679 ntBASIC18.27■□□□□ 0.52
TCRBV7S3A2A0A539 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.27■□□□□ 0.51
TCRBV7S3A2A0A539 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 AC022211.2-201ENST00000585075 2527 ntBASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 REXO1L11P-201ENST00000620964 1927 ntBASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 CROCCP2-202ENST00000412962 2773 ntBASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TCRBV7S3A2A0A539 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AC087499.1-201ENST00000418141 1075 ntBASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AC093827.2-201ENST00000512654 315 ntBASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms