Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 KRT8P50-201ENST00000562022 1438 ntBASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 AD000864.1-201ENST00000624076 2295 ntBASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF103-CHMP3A0A140T963 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF103-CHMP3A0A140T963 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIR718-201ENST00000390190 70 ntBASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC008550.1-201ENST00000511500 884 ntBASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF103-CHMP3A0A140T963 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF103-CHMP3A0A140T963 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF103-CHMP3A0A140T963 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF103-CHMP3A0A140T963 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 UNC93B2-201ENST00000285383 730 ntBASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 TSPY7P-201ENST00000431358 1114 ntBASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 RBM17P1-201ENST00000453646 1190 ntBASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 MIR4785-201ENST00000585005 73 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms