Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 AC005034.1-201ENST00000426657 489 ntBASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 AL390955.2-201ENST00000603032 514 ntBASIC21.83■■□□□ 1.08
ARFGEF1Q9Y6D6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 AC005225.4-201ENST00000557330 545 ntBASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ARFGEF1Q9Y6D6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 FAM86GP-201ENST00000448322 971 ntBASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 MIR4745-201ENST00000577608 62 ntBASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARFGEF1Q9Y6D6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC015922.1-201ENST00000421102 1152 ntBASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC073592.5-201ENST00000624854 528 ntBASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC015911.4-201ENST00000588022 1070 ntBASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC093484.2-201ENST00000580996 2166 ntBASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARFGEF1Q9Y6D6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 SIGLEC30P-201ENST00000455569 941 ntBASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 AC067863.1-201ENST00000494933 530 ntBASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms