Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 NUS1P1-201ENST00000446295 882 ntBASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 MINOS1P3-201ENST00000457048 203 ntBASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 DUTP2-201ENST00000519164 463 ntBASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 AC099336.1-202ENST00000602961 463 ntBASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX9Q9Y5X1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 FOSL1P1-201ENST00000511041 816 ntBASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AC005336.2-201ENST00000593183 939 ntBASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AC138894.3-201ENST00000603787 634 ntBASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX9Q9Y5X1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 AC022898.2-201ENST00000616822 1312 ntBASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX9Q9Y5X1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNX9Q9Y5X1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNX9Q9Y5X1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNX9Q9Y5X1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX9Q9Y5X1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNX9Q9Y5X1 HTR7P1-202ENST00000624664 4411 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms