Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 AL138688.1-201ENST00000624851 1594 ntBASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 AC138932.1-201ENST00000534164 6830 ntBASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 LINC00602-201ENST00000629776 2065 ntBASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 ECEL1P3-201ENST00000427961 737 ntBASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 AL023806.1-201ENST00000603994 1649 ntBASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA3Q9Y5H8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 AC113404.2-201ENST00000507884 177 ntBASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA3Q9Y5H8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 AP000523.1-201ENST00000398242 1049 ntBASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 AC090340.1-201ENST00000620778 4980 ntBASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms