Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 FDX1P1-201ENST00000449115 551 ntBASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 KRT8P7-201ENST00000533003 1432 ntBASIC17.8■□□□□ 0.44
PCDHGA4Q9Y5G9 AL162727.3-201ENST00000635661 2787 ntBASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 AC004870.1-201ENST00000315132 882 ntBASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 AC034232.1-201ENST00000506026 1064 ntBASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA4Q9Y5G9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 KRT18P23-201ENST00000435622 1283 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TSSC2-201ENST00000450217 709 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 RASA4DP-201ENST00000460726 1199 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AC092597.1-201ENST00000487352 616 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 OR13I1P-201ENST00000609811 1264 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AC112497.1-201ENST00000624824 639 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AL499627.1-201ENST00000569373 2188 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 AC112777.1-201ENST00000540175 1423 ntBASIC17.78■□□□□ 0.44
PCDHGA4Q9Y5G9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms