Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 HCG4B-203ENST00000450128 991 ntBASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 AP002472.1-201ENST00000577490 586 ntBASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 AL513190.1-201ENST00000621254 727 ntBASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
RTCBQ9Y3I0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 AL078644.1-201ENST00000609881 752 ntBASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 ELL2P1-201ENST00000413990 1906 ntBASIC22.58■■□□□ 1.21
RTCBQ9Y3I0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTCBQ9Y3I0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.58■■□□□ 1.2
RTCBQ9Y3I0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 PRSS29P-201ENST00000440800 595 ntBASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 IGHV3-65-201ENST00000523210 341 ntBASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.57■■□□□ 1.2
RTCBQ9Y3I0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 GPR89P-201ENST00000407924 1495 ntBASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 AC092364.2-202ENST00000597012 1073 ntBASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 AC008667.4-201ENST00000607370 168 ntBASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
RTCBQ9Y3I0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 COX5BP2-201ENST00000392354 334 ntBASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 CEND1P1-201ENST00000451006 455 ntBASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms