Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 AC145285.6-201ENST00000604632 637 ntBASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 AC141257.4-201ENST00000634557 245 ntBASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 AC136944.6-201ENST00000634818 245 ntBASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 AL157888.1-201ENST00000631930 593 ntBASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 AC092865.7-201ENST00000641832 219 ntBASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF11Q9Y3C5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 AL138966.2-201ENST00000621997 464 ntBASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF11Q9Y3C5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF11Q9Y3C5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms