Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 GUSBP6-202ENST00000438529 1198 ntBASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 AC083906.2-201ENST00000511578 360 ntBASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 MIR4758-201ENST00000577688 71 ntBASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RCL1Q9Y2P8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 POM121L13P-201ENST00000422362 380 ntBASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 AL162430.1-201ENST00000480705 870 ntBASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 AC022517.1-201ENST00000592429 346 ntBASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 AL445675.2-201ENST00000620291 557 ntBASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RCL1Q9Y2P8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RCL1Q9Y2P8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms