Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CLCF1Q9UBD9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 INTS4P1-201ENST00000438455 1935 ntBASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AC009078.2-202ENST00000463353 338 ntBASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 DUTP2-201ENST00000519164 463 ntBASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AF238378.1-201ENST00000526806 358 ntBASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AP002469.2-201ENST00000531724 424 ntBASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLCF1Q9UBD9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.96■□□□□ 0.14
CLCF1Q9UBD9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCF1Q9UBD9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms