Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 IGHGP-201ENST00000390555 1178 ntBASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 AC011498.5-201ENST00000592027 486 ntBASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 IER3-202ENST00000376377 1350 ntBASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 SPDYE13P-201ENST00000445314 798 ntBASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 AC005332.3-201ENST00000589904 676 ntBASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 AC116407.4-201ENST00000623319 1061 ntBASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 AC104581.1-202ENST00000635932 2618 ntBASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PARPBPQ9NWS1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 FER1L4-210ENST00000615531 5998 ntBASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AC009113.1-201ENST00000570267 2443 ntBASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 FZD10-202ENST00000539839 3282 ntBASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 AC007613.1-201ENST00000572811 2597 ntBASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PARPBPQ9NWS1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms