Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM248Q9NWD8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM248Q9NWD8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM248Q9NWD8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TMEM248Q9NWD8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 KRT17P6-201ENST00000453795 1220 ntBASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 AC012615.1-201ENST00000565797 1299 ntBASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM248Q9NWD8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AC125634.1-201ENST00000438758 1403 ntBASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AC097374.2-201ENST00000618617 1306 ntBASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 IGHV3-47-201ENST00000425060 335 ntBASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AP000867.3-201ENST00000524675 377 ntBASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AL138831.2-201ENST00000606564 490 ntBASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 AC020763.4-201ENST00000623414 4170 ntBASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM248Q9NWD8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM248Q9NWD8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms