Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 VENTXP5-201ENST00000523979 775 ntBASIC17.95■□□□□ 0.46
TREX1Q9NSU2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
TREX1Q9NSU2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 AC009949.1-201ENST00000623048 1830 ntBASIC17.94■□□□□ 0.46
TREX1Q9NSU2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 ZNF444P1-201ENST00000559497 298 ntBASIC17.94■□□□□ 0.46
TREX1Q9NSU2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TREX1Q9NSU2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 AL353692.3-201ENST00000407031 1396 ntBASIC17.93■□□□□ 0.46
TREX1Q9NSU2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 TSPY12P-201ENST00000421279 868 ntBASIC17.93■□□□□ 0.46
TREX1Q9NSU2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 RN7SL850P-201ENST00000579959 291 ntBASIC17.93■□□□□ 0.46
TREX1Q9NSU2 AC083849.1-201ENST00000615227 514 ntBASIC17.93■□□□□ 0.46
TREX1Q9NSU2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.93■□□□□ 0.46
TREX1Q9NSU2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 LINC01311-201ENST00000565162 1445 ntBASIC17.92■□□□□ 0.46
TREX1Q9NSU2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AC092647.4-201ENST00000457211 535 ntBASIC17.92■□□□□ 0.46
TREX1Q9NSU2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 GPR32P1-201ENST00000601788 811 ntBASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AC116407.2-201ENST00000613639 860 ntBASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 PP12613-201ENST00000424958 2230 ntBASIC17.92■□□□□ 0.46
TREX1Q9NSU2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms