Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AF186996.4-201ENST00000467186 377 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 AL138831.2-201ENST00000606564 490 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 GPALPP1-207ENST00000611650 899 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 AL355877.3-201ENST00000622820 899 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 NEFHP1-201ENST00000412845 2629 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPS4Q9NQG7 LINC00602-201ENST00000629776 2065 ntBASIC18.61■□□□□ 0.57
HPS4Q9NQG7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 AC090340.1-201ENST00000620778 4980 ntBASIC18.6■□□□□ 0.57
HPS4Q9NQG7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS4Q9NQG7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 AC243591.1-201ENST00000452967 1364 ntBASIC18.59■□□□□ 0.57
HPS4Q9NQG7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 MIR574-201ENST00000385209 96 ntBASIC18.59■□□□□ 0.57
HPS4Q9NQG7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 AC009533.2-201ENST00000543664 586 ntBASIC18.59■□□□□ 0.57
HPS4Q9NQG7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 AL049840.3-201ENST00000602669 611 ntBASIC18.59■□□□□ 0.57
HPS4Q9NQG7 AP001269.4-201ENST00000609611 512 ntBASIC18.59■□□□□ 0.57
HPS4Q9NQG7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS4Q9NQG7 INTS4P1-201ENST00000438455 1935 ntBASIC18.59■□□□□ 0.57
HPS4Q9NQG7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HPS4Q9NQG7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 MIR7706-201ENST00000613747 67 ntBASIC18.58■□□□□ 0.56
HPS4Q9NQG7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.58■□□□□ 0.56
HPS4Q9NQG7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms