Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTN4Q9NQC3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 AC005829.2-201ENST00000571422 1056 ntBASIC21.25■□□□□ 0.99
RTN4Q9NQC3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 AL050303.2-201ENST00000619798 666 ntBASIC21.25■□□□□ 0.99
RTN4Q9NQC3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTN4Q9NQC3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTN4Q9NQC3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 AL162741.1-201ENST00000565563 1558 ntBASIC21.23■□□□□ 0.99
RTN4Q9NQC3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 BX276092.2-201ENST00000417668 665 ntBASIC21.23■□□□□ 0.99
RTN4Q9NQC3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.23■□□□□ 0.99
RTN4Q9NQC3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 AC144831.1-201ENST00000573312 2656 ntBASIC21.22■□□□□ 0.99
RTN4Q9NQC3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms