Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIPK3Q9H422 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.6■□□□□ 0.73
HIPK3Q9H422 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 PRYP5-201ENST00000451909 266 ntBASIC19.59■□□□□ 0.73
HIPK3Q9H422 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 YBX1P5-201ENST00000509441 847 ntBASIC19.59■□□□□ 0.73
HIPK3Q9H422 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 AC087289.5-201ENST00000586076 3175 ntBASIC19.59■□□□□ 0.73
HIPK3Q9H422 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HIPK3Q9H422 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIPK3Q9H422 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
HIPK3Q9H422 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
HIPK3Q9H422 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.58■□□□□ 0.73
HIPK3Q9H422 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIPK3Q9H422 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIPK3Q9H422 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIPK3Q9H422 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 MIR4469-201ENST00000583919 79 ntBASIC19.58■□□□□ 0.72
HIPK3Q9H422 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIPK3Q9H422 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIPK3Q9H422 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.58■□□□□ 0.72
HIPK3Q9H422 AC002310.6-201ENST00000624451 1377 ntBASIC19.57■□□□□ 0.72
HIPK3Q9H422 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 CYMP-203ENST00000474680 1263 ntBASIC19.57■□□□□ 0.72
HIPK3Q9H422 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 AD001527.2-201ENST00000622994 785 ntBASIC19.57■□□□□ 0.72
HIPK3Q9H422 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms