Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VPS11Q9H270 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VPS11Q9H270 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.13■□□□□ 0.49
VPS11Q9H270 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS11Q9H270 UBE2SP1-201ENST00000450587 669 ntBASIC18.13■□□□□ 0.49
VPS11Q9H270 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.13■□□□□ 0.49
VPS11Q9H270 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS11Q9H270 AL049637.2-201ENST00000641778 930 ntBASIC18.13■□□□□ 0.49
VPS11Q9H270 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
VPS11Q9H270 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
VPS11Q9H270 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS11Q9H270 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS11Q9H270 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VPS11Q9H270 AC022211.2-201ENST00000585075 2527 ntBASIC18.12■□□□□ 0.49
VPS11Q9H270 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS11Q9H270 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS11Q9H270 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VPS11Q9H270 LINC00602-201ENST00000629776 2065 ntBASIC18.12■□□□□ 0.49
VPS11Q9H270 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VPS11Q9H270 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.12■□□□□ 0.49
VPS11Q9H270 AC098590.1-201ENST00000468126 897 ntBASIC18.12■□□□□ 0.49
VPS11Q9H270 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
VPS11Q9H270 AC106820.2-201ENST00000563775 3264 ntBASIC18.12■□□□□ 0.49
VPS11Q9H270 HOXB1-202ENST00000577092 1414 ntBASIC18.12■□□□□ 0.49
VPS11Q9H270 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
VPS11Q9H270 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 LINC01126-201ENST00000623515 1646 ntBASIC18.12■□□□□ 0.49
VPS11Q9H270 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS11Q9H270 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS11Q9H270 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS11Q9H270 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VPS11Q9H270 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 AC012618.2-201ENST00000428058 849 ntBASIC18.11■□□□□ 0.49
VPS11Q9H270 AP003041.3-201ENST00000527151 707 ntBASIC18.11■□□□□ 0.49
VPS11Q9H270 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 AC233702.5-201ENST00000584107 538 ntBASIC18.11■□□□□ 0.49
VPS11Q9H270 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 AC026471.5-201ENST00000615068 467 ntBASIC18.11■□□□□ 0.49
VPS11Q9H270 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 AC093010.1-201ENST00000473625 1624 ntBASIC18.11■□□□□ 0.49
VPS11Q9H270 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
VPS11Q9H270 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VPS11Q9H270 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS11Q9H270 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms