Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 AC027307.3-201ENST00000594262 1100 ntBASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 AC011467.2-201ENST00000598425 242 ntBASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 AC112907.3-201ENST00000577781 2400 ntBASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3Q9BZ76 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3Q9BZ76 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3Q9BZ76 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNTNAP3Q9BZ76 AC007225.1-201ENST00000566331 1836 ntBASIC17.08■□□□□ 0.33
CNTNAP3Q9BZ76 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.08■□□□□ 0.33
CNTNAP3Q9BZ76 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 FAM207CP-201ENST00000443486 507 ntBASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 ACTG1P14-201ENST00000446382 1122 ntBASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 AC067863.1-201ENST00000494933 530 ntBASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CNTNAP3Q9BZ76 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 AC073621.1-201ENST00000392730 636 ntBASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 FAM58CP-201ENST00000435741 640 ntBASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 IGHV3-71-201ENST00000523324 359 ntBASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 MIR3180-4-201ENST00000582223 153 ntBASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 AC018445.3-201ENST00000624177 1945 ntBASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 BX323043.1-201ENST00000641006 1765 ntBASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNTNAP3Q9BZ76 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms