Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 AL049597.2-201ENST00000565575 961 ntBASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 AC005332.3-201ENST00000589904 676 ntBASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 AL390719.2-201ENST00000606993 987 ntBASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNRNP25Q9BV90 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP25Q9BV90 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 AL645929.1-201ENST00000420084 975 ntBASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 TSPY12P-201ENST00000421279 868 ntBASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 NTF6B-201ENST00000591913 560 ntBASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 Z83836.1-201ENST00000624605 1642 ntBASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP25Q9BV90 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 AL031133.1-201ENST00000406807 723 ntBASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 AC009154.2-201ENST00000621177 724 ntBASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP25Q9BV90 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms