Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 AC004233.3-201ENST00000607794 1269 ntBASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 MIR6805-201ENST00000615055 62 ntBASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN3Q9BTN0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN3Q9BTN0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN3Q9BTN0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.83■□□□□ 0.45
LRFN3Q9BTN0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.83■□□□□ 0.45
LRFN3Q9BTN0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 HAUS4P1-201ENST00000406739 1145 ntBASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 SPDYE11-202ENST00000450699 704 ntBASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 SPDYE9P-201ENST00000570642 692 ntBASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 SPDYE10P-202ENST00000612005 668 ntBASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 SPDYE8P-202ENST00000612377 668 ntBASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
LRFN3Q9BTN0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 LINC00565-201ENST00000562710 2331 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 AL671277.1-201ENST00000429656 993 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 GPS2P2-201ENST00000430745 888 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 ACA64.2-201ENST00000459014 129 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 GIMAP3P-201ENST00000495150 836 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 GGTLC5P-201ENST00000617623 998 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN3Q9BTN0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 TEX21P-204ENST00000641479 1693 ntBASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 MIR658-201ENST00000385210 100 ntBASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 HCG4-201ENST00000418983 998 ntBASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 FAM86C2P-203ENST00000528684 1004 ntBASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 AC008677.1-201ENST00000519230 1561 ntBASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN3Q9BTN0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms