Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.68□□□□□ -0.22
VGLL1Q99990 CRYGFP-201ENST00000418459 633 ntBASIC13.68□□□□□ -0.22
VGLL1Q99990 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.68□□□□□ -0.22
VGLL1Q99990 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 ITM2C-210ENST00000620962 501 ntBASIC13.68□□□□□ -0.22
VGLL1Q99990 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 PP12613-201ENST00000424958 2230 ntBASIC13.68□□□□□ -0.22
VGLL1Q99990 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
VGLL1Q99990 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
VGLL1Q99990 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.68□□□□□ -0.22
VGLL1Q99990 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 AC093010.1-201ENST00000473625 1624 ntBASIC13.68□□□□□ -0.22
VGLL1Q99990 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.68□□□□□ -0.22
VGLL1Q99990 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VGLL1Q99990 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.67□□□□□ -0.22
VGLL1Q99990 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VGLL1Q99990 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VGLL1Q99990 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 KRT18P29-201ENST00000397031 1267 ntBASIC13.67□□□□□ -0.22
VGLL1Q99990 KRT18P23-201ENST00000435622 1283 ntBASIC13.67□□□□□ -0.22
VGLL1Q99990 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.67□□□□□ -0.22
VGLL1Q99990 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
VGLL1Q99990 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 LINC01126-201ENST00000623515 1646 ntBASIC13.67□□□□□ -0.22
VGLL1Q99990 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.67□□□□□ -0.22
VGLL1Q99990 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.67□□□□□ -0.22
VGLL1Q99990 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VGLL1Q99990 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
VGLL1Q99990 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 AC108860.2-201ENST00000562760 2183 ntBASIC13.66□□□□□ -0.22
VGLL1Q99990 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 KRT18P55-202ENST00000578578 1546 ntBASIC13.66□□□□□ -0.22
VGLL1Q99990 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.66□□□□□ -0.22
VGLL1Q99990 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.66□□□□□ -0.22
VGLL1Q99990 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.66□□□□□ -0.22
VGLL1Q99990 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.66□□□□□ -0.22
VGLL1Q99990 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
VGLL1Q99990 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.66□□□□□ -0.22
VGLL1Q99990 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VGLL1Q99990 SIRPAP1-201ENST00000448467 1770 ntBASIC13.66□□□□□ -0.22
VGLL1Q99990 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VGLL1Q99990 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
VGLL1Q99990 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VGLL1Q99990 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VGLL1Q99990 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
VGLL1Q99990 AC080080.1-201ENST00000625121 2420 ntBASIC13.65□□□□□ -0.22
VGLL1Q99990 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms