Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE1Q99829 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE1Q99829 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
CPNE1Q99829 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 AC010947.1-201ENST00000623454 693 ntBASIC18.01■□□□□ 0.47
CPNE1Q99829 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE1Q99829 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE1Q99829 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CPNE1Q99829 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CPNE1Q99829 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18■□□□□ 0.47
CPNE1Q99829 AC133963.1-201ENST00000504166 1679 ntBASIC18■□□□□ 0.47
CPNE1Q99829 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPNE1Q99829 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18■□□□□ 0.47
CPNE1Q99829 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18■□□□□ 0.47
CPNE1Q99829 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18■□□□□ 0.47
CPNE1Q99829 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18■□□□□ 0.47
CPNE1Q99829 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPNE1Q99829 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CPNE1Q99829 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18■□□□□ 0.47
CPNE1Q99829 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18■□□□□ 0.47
CPNE1Q99829 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE1Q99829 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18■□□□□ 0.47
CPNE1Q99829 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 KRT8P9-201ENST00000558927 1449 ntBASIC17.99■□□□□ 0.47
CPNE1Q99829 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPNE1Q99829 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CPNE1Q99829 AL023806.1-201ENST00000603994 1649 ntBASIC17.99■□□□□ 0.47
CPNE1Q99829 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 HMGA1P5-201ENST00000412453 271 ntBASIC17.99■□□□□ 0.47
CPNE1Q99829 PVRIG2P-201ENST00000435460 978 ntBASIC17.99■□□□□ 0.47
CPNE1Q99829 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE1Q99829 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE1Q99829 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE1Q99829 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE1Q99829 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 FAM87A-204ENST00000613235 858 ntBASIC17.99■□□□□ 0.47
CPNE1Q99829 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE1Q99829 TMEM191A-211ENST00000637163 1067 ntBASIC17.99■□□□□ 0.47
CPNE1Q99829 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CPNE1Q99829 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
CPNE1Q99829 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPNE1Q99829 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE1Q99829 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE1Q99829 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE1Q99829 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE1Q99829 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPNE1Q99829 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE1Q99829 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE1Q99829 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE1Q99829 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPNE1Q99829 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE1Q99829 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.98■□□□□ 0.47
CPNE1Q99829 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms