Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP4Q99569 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.54■□□□□ 0.4
PKP4Q99569 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 AC005332.1-201ENST00000577698 1310 ntBASIC17.53■□□□□ 0.4
PKP4Q99569 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.53■□□□□ 0.4
PKP4Q99569 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 AC008764.6-201ENST00000595909 2069 ntBASIC17.53■□□□□ 0.4
PKP4Q99569 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.53■□□□□ 0.4
PKP4Q99569 TSPY12P-201ENST00000421279 868 ntBASIC17.53■□□□□ 0.4
PKP4Q99569 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 KRT18P65-201ENST00000439811 1286 ntBASIC17.53■□□□□ 0.4
PKP4Q99569 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.53■□□□□ 0.4
PKP4Q99569 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PKP4Q99569 AL445228.2-201ENST00000605589 952 ntBASIC17.53■□□□□ 0.4
PKP4Q99569 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.53■□□□□ 0.4
PKP4Q99569 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PKP4Q99569 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP4Q99569 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP4Q99569 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.52■□□□□ 0.4
PKP4Q99569 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.52■□□□□ 0.4
PKP4Q99569 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP4Q99569 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP4Q99569 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.52■□□□□ 0.4
PKP4Q99569 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.52■□□□□ 0.4
PKP4Q99569 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.52■□□□□ 0.4
PKP4Q99569 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.52■□□□□ 0.4
PKP4Q99569 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.52■□□□□ 0.4
PKP4Q99569 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PKP4Q99569 AC011498.5-201ENST00000592027 486 ntBASIC17.52■□□□□ 0.4
PKP4Q99569 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PKP4Q99569 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PKP4Q99569 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.52■□□□□ 0.4
PKP4Q99569 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PKP4Q99569 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PKP4Q99569 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PKP4Q99569 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PKP4Q99569 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
PKP4Q99569 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PKP4Q99569 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP4Q99569 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 AL133373.2-201ENST00000623187 2828 ntBASIC17.51■□□□□ 0.39
PKP4Q99569 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 ARMC10P1-201ENST00000313754 855 ntBASIC17.51■□□□□ 0.39
PKP4Q99569 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PKP4Q99569 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP4Q99569 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.51■□□□□ 0.39
PKP4Q99569 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.51■□□□□ 0.39
PKP4Q99569 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.51■□□□□ 0.39
PKP4Q99569 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms