Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP54Q96N23 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP54Q96N23 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP54Q96N23 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 AC004877.2-201ENST00000623941 599 ntBASIC17.54■□□□□ 0.4
CFAP54Q96N23 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP54Q96N23 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP54Q96N23 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CFAP54Q96N23 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP54Q96N23 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 IGHV3-71-201ENST00000523324 359 ntBASIC17.53■□□□□ 0.4
CFAP54Q96N23 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AL033527.4-201ENST00000641026 673 ntBASIC17.53■□□□□ 0.4
CFAP54Q96N23 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 COX5BP8-201ENST00000416911 349 ntBASIC17.53■□□□□ 0.4
CFAP54Q96N23 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AL357033.4-201ENST00000617703 1807 ntBASIC17.53■□□□□ 0.4
CFAP54Q96N23 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 RN7SL692P-201ENST00000464677 288 ntBASIC17.53■□□□□ 0.4
CFAP54Q96N23 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 AC006557.2-201ENST00000592985 1240 ntBASIC17.53■□□□□ 0.4
CFAP54Q96N23 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP54Q96N23 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CFAP54Q96N23 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 PMPCAP1-201ENST00000508114 1576 ntBASIC17.52■□□□□ 0.4
CFAP54Q96N23 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CFAP54Q96N23 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CFAP54Q96N23 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CFAP54Q96N23 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.52■□□□□ 0.39
CFAP54Q96N23 BASP1P1-201ENST00000430708 665 ntBASIC17.52■□□□□ 0.39
CFAP54Q96N23 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.52■□□□□ 0.39
CFAP54Q96N23 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.52■□□□□ 0.39
CFAP54Q96N23 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.52■□□□□ 0.39
CFAP54Q96N23 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CFAP54Q96N23 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CFAP54Q96N23 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CFAP54Q96N23 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CFAP54Q96N23 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.52■□□□□ 0.39
CFAP54Q96N23 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.52■□□□□ 0.39
CFAP54Q96N23 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms