Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 AC040169.1-201ENST00000565382 521 ntBASIC23.58■■□□□ 1.37
NBPF4Q96M43 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.58■■□□□ 1.37
NBPF4Q96M43 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NBPF4Q96M43 AC073592.3-201ENST00000625118 1834 ntBASIC23.58■■□□□ 1.37
NBPF4Q96M43 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
NBPF4Q96M43 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
NBPF4Q96M43 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
NBPF4Q96M43 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
NBPF4Q96M43 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.58■■□□□ 1.36
NBPF4Q96M43 SIRPAP1-201ENST00000448467 1770 ntBASIC23.57■■□□□ 1.36
NBPF4Q96M43 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NBPF4Q96M43 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NBPF4Q96M43 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 AC073592.5-201ENST00000624854 528 ntBASIC23.57■■□□□ 1.36
NBPF4Q96M43 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NBPF4Q96M43 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NBPF4Q96M43 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NBPF4Q96M43 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NBPF4Q96M43 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
NBPF4Q96M43 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.56■■□□□ 1.36
NBPF4Q96M43 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NBPF4Q96M43 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 AC023274.1-201ENST00000418278 595 ntBASIC23.55■■□□□ 1.36
NBPF4Q96M43 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 KRT18P2-201ENST00000447938 1258 ntBASIC23.55■■□□□ 1.36
NBPF4Q96M43 RNA5SP416-201ENST00000516838 111 ntBASIC23.55■■□□□ 1.36
NBPF4Q96M43 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 AL049757.1-201ENST00000616842 1596 ntBASIC23.55■■□□□ 1.36
NBPF4Q96M43 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NBPF4Q96M43 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.55■■□□□ 1.36
NBPF4Q96M43 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 AC132938.5-201ENST00000624980 1813 ntBASIC23.54■■□□□ 1.36
NBPF4Q96M43 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NBPF4Q96M43 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 AC004832.2-201ENST00000426397 482 ntBASIC23.54■■□□□ 1.36
NBPF4Q96M43 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.54■■□□□ 1.36
NBPF4Q96M43 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms