Protein–RNA interactions for Protein: Q96LB8

PGLYRP4, Peptidoglycan recognition protein 4, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGLYRP4Q96LB8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 AF201337.1-201ENST00000520239 748 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 AC105036.2-201ENST00000569468 176 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 AL121832.2-201ENST00000610979 668 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 MIR5787-201ENST00000611784 55 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 AC120498.8-201ENST00000614275 531 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 PCDH8P1-201ENST00000428983 2773 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 KRT8P11-201ENST00000409686 1436 ntBASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PGLYRP4Q96LB8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CROCCP2-202ENST00000412962 2773 ntBASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 DUSP5P2-201ENST00000426873 1033 ntBASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 POU5F1P3-201ENST00000428824 1078 ntBASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PGLYRP4Q96LB8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
PGLYRP4Q96LB8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PGLYRP4Q96LB8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PGLYRP4Q96LB8 PCDHB19P-201ENST00000570871 2371 ntBASIC13.53□□□□□ -0.24
PGLYRP4Q96LB8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PGLYRP4Q96LB8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PGLYRP4Q96LB8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms