Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 AC007688.1-201ENST00000475592 759 ntBASIC18.95■□□□□ 0.62
RNF25Q96BH1 AC093827.2-201ENST00000512654 315 ntBASIC18.95■□□□□ 0.62
RNF25Q96BH1 MIR3180-4-201ENST00000582223 153 ntBASIC18.95■□□□□ 0.62
RNF25Q96BH1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 HMGA1P5-201ENST00000412453 271 ntBASIC18.94■□□□□ 0.62
RNF25Q96BH1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF25Q96BH1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF25Q96BH1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 LINC01568-207ENST00000641790 1380 ntBASIC18.93■□□□□ 0.62
RNF25Q96BH1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.93■□□□□ 0.62
RNF25Q96BH1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF25Q96BH1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF25Q96BH1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms