Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RNF34Q969K3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF34Q969K3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF34Q969K3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF34Q969K3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF34Q969K3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF34Q969K3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF34Q969K3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF34Q969K3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF34Q969K3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF34Q969K3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF34Q969K3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF34Q969K3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF34Q969K3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RNF34Q969K3 NEFHP1-201ENST00000412845 2629 ntBASIC18.83■□□□□ 0.61
RNF34Q969K3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF34Q969K3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF34Q969K3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 UPK3BP1-201ENST00000428678 509 ntBASIC18.83■□□□□ 0.6
RNF34Q969K3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
RNF34Q969K3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF34Q969K3 KRT8P26-201ENST00000534154 1276 ntBASIC18.83■□□□□ 0.6
RNF34Q969K3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF34Q969K3 AC093458.2-201ENST00000623150 629 ntBASIC18.83■□□□□ 0.6
RNF34Q969K3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF34Q969K3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNF34Q969K3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF34Q969K3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF34Q969K3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF34Q969K3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF34Q969K3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNF34Q969K3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF34Q969K3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF34Q969K3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
RNF34Q969K3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF34Q969K3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF34Q969K3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RNF34Q969K3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNF34Q969K3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF34Q969K3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF34Q969K3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF34Q969K3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
RNF34Q969K3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RNF34Q969K3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RNF34Q969K3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 ABALON-201ENST00000629058 1903 ntBASIC18.81■□□□□ 0.6
RNF34Q969K3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF34Q969K3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF34Q969K3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF34Q969K3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF34Q969K3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF34Q969K3 GUSBP12-201ENST00000513727 720 ntBASIC18.81■□□□□ 0.6
RNF34Q969K3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF34Q969K3 AC069148.1-201ENST00000608741 768 ntBASIC18.81■□□□□ 0.6
RNF34Q969K3 IGHV3-41-201ENST00000613121 348 ntBASIC18.81■□□□□ 0.6
RNF34Q969K3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF34Q969K3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF34Q969K3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms