Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 NCF1C-201ENST00000438382 1427 ntBASIC19.21■□□□□ 0.67
HERVK_113Q902F9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 AC004877.2-201ENST00000623941 599 ntBASIC19.21■□□□□ 0.67
HERVK_113Q902F9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.2■□□□□ 0.66
HERVK_113Q902F9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 AC096734.2-201ENST00000562054 433 ntBASIC19.2■□□□□ 0.66
HERVK_113Q902F9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 AC010654.1-201ENST00000615722 808 ntBASIC19.2■□□□□ 0.66
HERVK_113Q902F9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.2■□□□□ 0.66
HERVK_113Q902F9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 AC004449.1-201ENST00000564240 433 ntBASIC19.19■□□□□ 0.66
HERVK_113Q902F9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 AC093512.1-201ENST00000617969 520 ntBASIC19.19■□□□□ 0.66
HERVK_113Q902F9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERVK_113Q902F9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AL158211.5-201ENST00000623583 2518 ntBASIC19.18■□□□□ 0.66
HERVK_113Q902F9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AC132938.6-201ENST00000623828 1655 ntBASIC19.18■□□□□ 0.66
HERVK_113Q902F9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 FAM58CP-201ENST00000435741 640 ntBASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 KRT19P2-202ENST00000557173 1012 ntBASIC19.18■□□□□ 0.66
HERVK_113Q902F9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 AC010507.1-201ENST00000633895 436 ntBASIC19.18■□□□□ 0.66
HERVK_113Q902F9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERVK_113Q902F9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms