Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AL162727.3-201ENST00000635661 2787 ntBASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CKAP2Q8WWK9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CKAP2Q8WWK9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CKAP2Q8WWK9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 AC036111.1-201ENST00000533973 1582 ntBASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 DOC2GP-204ENST00000639052 2548 ntBASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 AC098934.4-201ENST00000564127 592 ntBASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 AC011298.2-201ENST00000617989 482 ntBASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKAP2Q8WWK9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 AC104771.1-201ENST00000603335 964 ntBASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
CKAP2Q8WWK9 AC008894.3-201ENST00000624324 3103 ntBASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKAP2Q8WWK9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms