Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 IGHV3-65-201ENST00000523210 341 ntBASIC21.77■■□□□ 1.08
SNED1Q8TER0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SNED1Q8TER0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.77■■□□□ 1.07
SNED1Q8TER0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SNED1Q8TER0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SNED1Q8TER0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 ELL2P1-201ENST00000413990 1906 ntBASIC21.76■■□□□ 1.07
SNED1Q8TER0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.76■■□□□ 1.07
SNED1Q8TER0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 AC008667.4-201ENST00000607370 168 ntBASIC21.76■■□□□ 1.07
SNED1Q8TER0 AL078644.1-201ENST00000609881 752 ntBASIC21.76■■□□□ 1.07
SNED1Q8TER0 AC073592.5-201ENST00000624854 528 ntBASIC21.76■■□□□ 1.07
SNED1Q8TER0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNED1Q8TER0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.76■■□□□ 1.07
SNED1Q8TER0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNED1Q8TER0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNED1Q8TER0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.75■■□□□ 1.07
SNED1Q8TER0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNED1Q8TER0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNED1Q8TER0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 AC132938.5-201ENST00000624980 1813 ntBASIC21.75■■□□□ 1.07
SNED1Q8TER0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.75■■□□□ 1.07
SNED1Q8TER0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 CNN2P11-201ENST00000429351 262 ntBASIC21.74■■□□□ 1.07
SNED1Q8TER0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 GPR89P-201ENST00000407924 1495 ntBASIC21.74■■□□□ 1.07
SNED1Q8TER0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.74■■□□□ 1.07
SNED1Q8TER0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNED1Q8TER0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
SNED1Q8TER0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 VN2R19P-201ENST00000442399 1052 ntBASIC21.73■■□□□ 1.07
SNED1Q8TER0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms