Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH19Q8TAB3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 SPDYE13P-201ENST00000445314 798 ntBASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH19Q8TAB3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH19Q8TAB3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 KRT18P65-201ENST00000439811 1286 ntBASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH19Q8TAB3 LINC01311-201ENST00000565162 1445 ntBASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 AC022898.2-201ENST00000616822 1312 ntBASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 IGHGP-201ENST00000390555 1178 ntBASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 AC091076.1-201ENST00000610741 619 ntBASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 AC083849.1-201ENST00000615227 514 ntBASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms