Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AL136038.3-201ENST00000561909 1096 ntBASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 AC083849.1-201ENST00000615227 514 ntBASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 TSPY12P-201ENST00000421279 868 ntBASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AC009154.2-201ENST00000621177 724 ntBASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AL121956.5-201ENST00000625261 221 ntBASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.18■□□□□ 0.34
SRFBP1Q8NEF9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 AL353692.3-201ENST00000407031 1396 ntBASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 AC132938.6-201ENST00000623828 1655 ntBASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 PKD1P1-201ENST00000458669 6805 ntBASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRFBP1Q8NEF9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms