Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 VENTXP7-201ENST00000475503 772 ntBASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 AC074051.2-201ENST00000565115 352 ntBASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 NSUN5P1-202ENST00000421140 1535 ntBASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 NSUN5P2-203ENST00000457352 1529 ntBASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 CLEC4GP1-201ENST00000596555 870 ntBASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 AL138831.2-201ENST00000606564 490 ntBASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 KRT18P55-202ENST00000578578 1546 ntBASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01555Q8NAE3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 AC104819.1-201ENST00000504587 486 ntBASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 MIR3652-201ENST00000579335 131 ntBASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 AC012313.10-201ENST00000623509 926 ntBASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LINC01555Q8NAE3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms