Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 KRT8P32-201ENST00000512863 1461 ntBASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 AC006449.5-201ENST00000610658 2098 ntBASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 GMCL1P1-201ENST00000463439 1581 ntBASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD2Q8IV50 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms