Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 AP001269.4-201ENST00000609611 512 ntBASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 WIZP1-201ENST00000531444 2299 ntBASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 AP005117.1-201ENST00000584346 1413 ntBASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 FGFR3P6-201ENST00000457012 610 ntBASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCLRE1AQ6PJP8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 FAM220CP-201ENST00000395253 831 ntBASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 AC096633.1-201ENST00000422446 749 ntBASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 KRT18P67-201ENST00000432816 1264 ntBASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 AF186996.4-201ENST00000467186 377 ntBASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 BX640515.1-201ENST00000617215 977 ntBASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DCLRE1AQ6PJP8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AL590627.1-203ENST00000421194 1026 ntBASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AC007967.3-201ENST00000434308 558 ntBASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 SCARNA2-201ENST00000458748 420 ntBASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AL773604.1-201ENST00000617417 272 ntBASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AC117500.6-201ENST00000624871 588 ntBASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
DCLRE1AQ6PJP8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms