Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD3Q6PCD5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 TPSP2-201ENST00000561760 610 ntBASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 AC090616.6-201ENST00000582640 721 ntBASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 AC124864.1-201ENST00000623408 392 ntBASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 AC012313.10-201ENST00000623509 926 ntBASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 LINC00602-201ENST00000629776 2065 ntBASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD3Q6PCD5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 LINC00265-3P-201ENST00000447588 903 ntBASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 AC113404.2-201ENST00000507884 177 ntBASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 AL592071.1-201ENST00000611956 408 ntBASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
RFWD3Q6PCD5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 TOB2P1-201ENST00000469761 992 ntBASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 GUSBP12-201ENST00000513727 720 ntBASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC008687.5-201ENST00000593746 558 ntBASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RFWD3Q6PCD5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms