Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 AC022145.2-201ENST00000598203 171 ntBASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 AC007064.4-201ENST00000637740 555 ntBASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCRAQ6ISU1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 AC010460.3-201ENST00000511359 1579 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 AC096633.1-201ENST00000422446 749 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 AC103564.2-201ENST00000432853 1299 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 AC007274.1-201ENST00000439805 662 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 TERF1P3-201ENST00000505638 1227 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 DUX4L27-201ENST00000554796 1261 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 SLC25A24-204ENST00000569674 2357 ntBASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTCRAQ6ISU1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 AC067863.1-201ENST00000494933 530 ntBASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 AC023141.13-201ENST00000604991 943 ntBASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCRAQ6ISU1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 AC236430.1-201ENST00000402231 743 ntBASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms