Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 MIR149-201ENST00000384879 89 ntBASIC18.87■□□□□ 0.61
RNF43Q68DV7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 KRT8P26-201ENST00000534154 1276 ntBASIC18.87■□□□□ 0.61
RNF43Q68DV7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 AL390719.2-201ENST00000606993 987 ntBASIC18.87■□□□□ 0.61
RNF43Q68DV7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 AC073592.3-201ENST00000625118 1834 ntBASIC18.87■□□□□ 0.61
RNF43Q68DV7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF43Q68DV7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF43Q68DV7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.86■□□□□ 0.61
RNF43Q68DV7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 AP002383.4-201ENST00000442518 975 ntBASIC18.86■□□□□ 0.61
RNF43Q68DV7 UNC93B7-201ENST00000509439 705 ntBASIC18.86■□□□□ 0.61
RNF43Q68DV7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 MIR3180-1-201ENST00000580374 94 ntBASIC18.86■□□□□ 0.61
RNF43Q68DV7 MIR3180-3-201ENST00000584616 94 ntBASIC18.86■□□□□ 0.61
RNF43Q68DV7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 AL121672.3-201ENST00000608644 468 ntBASIC18.86■□□□□ 0.61
RNF43Q68DV7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF43Q68DV7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF43Q68DV7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF43Q68DV7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF43Q68DV7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF43Q68DV7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF43Q68DV7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RNF43Q68DV7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF43Q68DV7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF43Q68DV7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms