Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA1Q5Y7H0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA1Q5Y7H0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQA1Q5Y7H0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQA1Q5Y7H0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 AL096828.2-201ENST00000567259 1965 ntBASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 AL390719.2-201ENST00000606993 987 ntBASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 GUSBP12-201ENST00000513727 720 ntBASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 KRT8P26-201ENST00000534154 1276 ntBASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQA1Q5Y7H0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 IGHV3-41-201ENST00000613121 348 ntBASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA1Q5Y7H0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HLA-DQA1Q5Y7H0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.77■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC093010.1-201ENST00000473625 1624 ntBASIC16.77■□□□□ 0.27
HLA-DQA1Q5Y7H0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQA1Q5Y7H0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms